http://wiki.cogpo.org/api.php?action=feedcontributions&user=Turner&feedformat=atomCogPOwiki - User contributions [en]2024-03-28T19:21:56ZUser contributionsMediaWiki 1.31.6http://wiki.cogpo.org/index.php?title=Gustatory_Modality&diff=959Gustatory Modality2011-02-03T20:02:28Z<p>Turner: </p>
<hr />
<div>{{Condition Template<br />
|Definition=The gustatory modality is the stimulus modality pertaining to the sense of taste or flavor. It usually but not always arises through stimulation of the gustatory system (e.g., tastebuds, nasal receptors).<br />
|Definition Source=JT and AL<br />
|Parent Entity=Stimulus Modality<br />
|Example=In experiments in which subjects eat or drink food, the stimulus is characterizing as having a gustatory modality.<br />
|Comments=Some stimuli (e.g., a sip of coffee, a drop of grapefruit juice) may have both gustatory and olfactory modalities.<br />
|Created Date=2010/10/29<br />
|Curator=JT and AL<br />
|Curation Status=pending final vetting<br />
|URI=testing this<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Template:Condition_Template&diff=939Template:Condition Template2011-02-03T18:48:51Z<p>Turner: /* URI */</p>
<hr />
<div>[[Category:Condition Edit]]<br />
<noinclude><br />
This is the "Condition Template" template.<br />
It should be called in the following format:<br />
<pre><br />
{{Condition Template<br />
|Definition=<br />
|Definition Source=<br />
|Synonyms=<br />
|Parent Entity=<br />
|Example=<br />
|Logical Restrictions=<br />
|Comments=<br />
|Created Date=<br />
|Curator=<br />
|Curation Status=<br />
|URI=<br />
|Sub-Classes=<br />
}}<br />
</pre><br />
Edit the page to see the template text.<br />
</noinclude><includeonly><br />
{| class="wikitable"<br />
===Definition===<br />
| [[Definition::{{{Definition|}}}]]<br />
|-<br />
===Definition Source===<br />
| [[Definition Source::{{{Definition Source|}}}]]<br />
|-<br />
===Synonyms===<br />
| [[Synonyms::{{{Synonyms|}}}]]<br />
|-<br />
===Parent Entity===<br />
| [[Parent Entity::{{{Parent Entity|}}}]]<br />
|-<br />
===Example===<br />
| [[Example::{{{Example|}}}]]<br />
|-<br />
===Logical Restrictions===<br />
| [[Logical Restrictions::{{{Logical Restrictions|}}}]]<br />
|-<br />
===Comments===<br />
| [[Comments::{{{Comments|}}}]]<br />
|-<br />
<br />
===Created Date===<br />
| [[Created Date::{{{Created Date|}}}]]<br />
|-<br />
===Curator===<br />
| [[Curator::{{{Curator|}}}]]<br />
|-<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
<br />
===Sub-Classes===<br />
| [[Sub-Classes::{{{Sub-Classes|}}}]]<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::{{FULLPAGENAME}}]]<br />
| format=ul<br />
}}<br />
|}<br />
</includeonly></div>Turnerhttp://wiki.cogpo.org/index.php?title=Template:Condition_Template&diff=938Template:Condition Template2011-02-03T18:45:44Z<p>Turner: /* Comments */</p>
<hr />
<div>[[Category:Condition Edit]]<br />
<noinclude><br />
This is the "Condition Template" template.<br />
It should be called in the following format:<br />
<pre><br />
{{Condition Template<br />
|Definition=<br />
|Definition Source=<br />
|Synonyms=<br />
|Parent Entity=<br />
|Example=<br />
|Logical Restrictions=<br />
|Comments=<br />
|Created Date=<br />
|Curator=<br />
|Curation Status=<br />
|URI=<br />
|Sub-Classes=<br />
}}<br />
</pre><br />
Edit the page to see the template text.<br />
</noinclude><includeonly><br />
{| class="wikitable"<br />
===Definition===<br />
| [[Definition::{{{Definition|}}}]]<br />
|-<br />
===Definition Source===<br />
| [[Definition Source::{{{Definition Source|}}}]]<br />
|-<br />
===Synonyms===<br />
| [[Synonyms::{{{Synonyms|}}}]]<br />
|-<br />
===Parent Entity===<br />
| [[Parent Entity::{{{Parent Entity|}}}]]<br />
|-<br />
===Example===<br />
| [[Example::{{{Example|}}}]]<br />
|-<br />
===Logical Restrictions===<br />
| [[Logical Restrictions::{{{Logical Restrictions|}}}]]<br />
|-<br />
===Comments===<br />
| [[Comments::{{{Comments|}}}]]<br />
|-<br />
<br />
===Created Date===<br />
| [[Created Date::{{{Created Date|}}}]]<br />
|-<br />
===Curator===<br />
| [[Curator::{{{Curator|}}}]]<br />
|-<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00125<br />
<br />
===Sub-Classes===<br />
| [[Sub-Classes::{{{Sub-Classes|}}}]]<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::{{FULLPAGENAME}}]]<br />
| format=ul<br />
}}<br />
|}<br />
</includeonly></div>Turnerhttp://wiki.cogpo.org/index.php?title=Template:Condition_Template&diff=937Template:Condition Template2011-02-03T18:44:58Z<p>Turner: /* Curation Status */</p>
<hr />
<div>[[Category:Condition Edit]]<br />
<noinclude><br />
This is the "Condition Template" template.<br />
It should be called in the following format:<br />
<pre><br />
{{Condition Template<br />
|Definition=<br />
|Definition Source=<br />
|Synonyms=<br />
|Parent Entity=<br />
|Example=<br />
|Logical Restrictions=<br />
|Comments=<br />
|Created Date=<br />
|Curator=<br />
|Curation Status=<br />
|URI=<br />
|Sub-Classes=<br />
}}<br />
</pre><br />
Edit the page to see the template text.<br />
</noinclude><includeonly><br />
{| class="wikitable"<br />
===Definition===<br />
| [[Definition::{{{Definition|}}}]]<br />
|-<br />
===Definition Source===<br />
| [[Definition Source::{{{Definition Source|}}}]]<br />
|-<br />
===Synonyms===<br />
| [[Synonyms::{{{Synonyms|}}}]]<br />
|-<br />
===Parent Entity===<br />
| [[Parent Entity::{{{Parent Entity|}}}]]<br />
|-<br />
===Example===<br />
| [[Example::{{{Example|}}}]]<br />
|-<br />
===Logical Restrictions===<br />
| [[Logical Restrictions::{{{Logical Restrictions|}}}]]<br />
|-<br />
===Comments===<br />
| [[Comments::{{{Comments|}}}]]<br />
Not all stimuli have more specific roles, such as being a target or a reward.<br />
|-<br />
<br />
===Created Date===<br />
| [[Created Date::{{{Created Date|}}}]]<br />
|-<br />
===Curator===<br />
| [[Curator::{{{Curator|}}}]]<br />
|-<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00125<br />
<br />
===Sub-Classes===<br />
| [[Sub-Classes::{{{Sub-Classes|}}}]]<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::{{FULLPAGENAME}}]]<br />
| format=ul<br />
}}<br />
|}<br />
</includeonly></div>Turnerhttp://wiki.cogpo.org/index.php?title=Template:Condition_Template&diff=936Template:Condition Template2011-02-03T18:44:31Z<p>Turner: /* URI */</p>
<hr />
<div>[[Category:Condition Edit]]<br />
<noinclude><br />
This is the "Condition Template" template.<br />
It should be called in the following format:<br />
<pre><br />
{{Condition Template<br />
|Definition=<br />
|Definition Source=<br />
|Synonyms=<br />
|Parent Entity=<br />
|Example=<br />
|Logical Restrictions=<br />
|Comments=<br />
|Created Date=<br />
|Curator=<br />
|Curation Status=<br />
|URI=<br />
|Sub-Classes=<br />
}}<br />
</pre><br />
Edit the page to see the template text.<br />
</noinclude><includeonly><br />
{| class="wikitable"<br />
===Definition===<br />
| [[Definition::{{{Definition|}}}]]<br />
|-<br />
===Definition Source===<br />
| [[Definition Source::{{{Definition Source|}}}]]<br />
|-<br />
===Synonyms===<br />
| [[Synonyms::{{{Synonyms|}}}]]<br />
|-<br />
===Parent Entity===<br />
| [[Parent Entity::{{{Parent Entity|}}}]]<br />
|-<br />
===Example===<br />
| [[Example::{{{Example|}}}]]<br />
|-<br />
===Logical Restrictions===<br />
| [[Logical Restrictions::{{{Logical Restrictions|}}}]]<br />
|-<br />
===Comments===<br />
| [[Comments::{{{Comments|}}}]]<br />
Not all stimuli have more specific roles, such as being a target or a reward.<br />
|-<br />
<br />
===Created Date===<br />
| [[Created Date::{{{Created Date|}}}]]<br />
|-<br />
===Curator===<br />
| [[Curator::{{{Curator|}}}]]<br />
|-<br />
===Curation Status===<br />
| [[Curation Status::{{{Curation Status|}}}]]<br />
|-<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00125<br />
<br />
===Sub-Classes===<br />
| [[Sub-Classes::{{{Sub-Classes|}}}]]<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::{{FULLPAGENAME}}]]<br />
| format=ul<br />
}}<br />
|}<br />
</includeonly></div>Turnerhttp://wiki.cogpo.org/index.php?title=Instructions&diff=935Instructions2011-02-03T18:35:50Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The instructions are the explicit directions that are given to a subject to guide their behavioral [[Response]] during a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO:[http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23GenericallyDependentContinuant Generically Dependent Continuant]<br />
<br />
IAO: Generically Dependent Continuant -> Information Content Entity -> Directive Information Entity -> Action Specification<br />
<br />
===Example=== <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of the instructions. <br />
<br />
===Comments===<br />
Instructions serve the function that they lay out what the response behaviors should be for any set of stimuli in a condition.<br />
<br />
Formulated as a command. If a subject was instructed to read words aloud, the instruction is "Read" and the response type is "Speech"; rather than "Speak" as the instruction.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00028<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Instructions]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Instructions&diff=934Instructions2011-02-03T18:35:17Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The instructions are the explicit directions that are given to a subject to guide their behavioral [[Response]] during a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO:[http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23GenericallyDependentContinuant Generically Dependent Continuant]<br />
<br />
IAO: Generically Dependent Continuant -> Information Content Entity -> Directive Information Entity -> Action Specification<br />
<br />
===Example=== <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of the instructions. <br />
<br />
===Comments===<br />
Instructions serve the function that they lay out what the response behaviors should be for any set of stimuli in a condition.<br />
<br />
Formulated as a command. If a subject was instructed to read words aloud, the instruction is "Read" and the response type is "Speech"; rather than "Speak" as the instruction.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Instructions]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Modality&diff=933Response Modality2011-02-03T18:34:52Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The class of body parts through which the subject makes an [[Overt Response]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23FiatObjectPart Fiat Object Part]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the overt response can be a finger press for the oddball tones, and the response modality is the hand.<br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments=== <br />
In BrainMap (2009) response modality is "A body part which is used to perform the response activity".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00119<br />
<br />
===Sub-Classes===<br />
*[[Arm]]<br />
*[[Eye]]<br />
*[[Face]]<br />
*[[Foot]]<br />
*[[Hand]]<br />
*[[Leg]]<br />
*[[Mouth]]<br />
*[[Pelvis]]<br />
*[[Shoulder]]<br />
*[[Torso]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Modality&diff=932Response Modality2011-02-03T18:34:21Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The class of body parts through which the subject makes an [[Overt Response]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23FiatObjectPart Fiat Object Part]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the overt response can be a finger press for the oddball tones, and the response modality is the hand.<br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments=== <br />
In BrainMap (2009) response modality is "A body part which is used to perform the response activity".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
*[[Arm]]<br />
*[[Eye]]<br />
*[[Face]]<br />
*[[Foot]]<br />
*[[Hand]]<br />
*[[Leg]]<br />
*[[Mouth]]<br />
*[[Pelvis]]<br />
*[[Shoulder]]<br />
*[[Torso]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Overt_Response&diff=931Overt Response2011-02-03T18:33:56Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
An overt response is a [[Response]] made with a body part that is externally observable by others.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
The tapping of fingers as requested during a finger-tapping task is an overt response.<br />
<br />
===Logical Restrictions===<br />
An overt response is characterized by a [[Response Modality]].<br />
<br />
===Comments===<br />
Responses which do not include movement of a body part (e.g., changes in galvanic skin response in response to an emotional stimulus) are considered covert.<br />
<br />
===Created Date===<br />
2010/11/06<br />
<br />
===Curator===<br />
AL and JT<br />
<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00136<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Overt Response]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Overt_Response&diff=930Overt Response2011-02-03T18:33:31Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
An overt response is a [[Response]] made with a body part that is externally observable by others.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
The tapping of fingers as requested during a finger-tapping task is an overt response.<br />
<br />
===Logical Restrictions===<br />
An overt response is characterized by a [[Response Modality]].<br />
<br />
===Comments===<br />
Responses which do not include movement of a body part (e.g., changes in galvanic skin response in response to an emotional stimulus) are considered covert.<br />
<br />
===Created Date===<br />
2010/11/06<br />
<br />
===Curator===<br />
AL and JT<br />
<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Overt Response]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Covert_Response&diff=929Covert Response2011-02-03T18:33:15Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
A covert response is a [[Response]] made internal to the body, which is unobservable by external viewers.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
In a study of mental imagery, the silent visualization of an image by the subject is a covert response.<br />
<br />
===Logical Restrictions===<br />
A covert response cannot be characterized by a [[Response Modality]] since it is covert.<br />
<br />
===Comments===<br />
Covert responses may be indirectly measurable, as in the galvanic skin response after being startled by a loud noise, or EEG modification during a neural feedback study. <br />
<br />
If it is not a movement of the body, it's covert. <br />
<br />
Holding one's breath, however, is overt. <br />
<br />
BrainMap (2009) does not represent covert responses, but represents the lack of an overt response via Response Modality = None and Response Type = None.<br />
<br />
===Created Date===<br />
2010/02/01<br />
<br />
===Curator===<br />
JT and AL<br />
<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver2010.owl#COGPO_00176<br />
<br />
===Related Concepts===<br />
*[[Response]]<br />
*[[Overt Response]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Covert_Response&diff=928Covert Response2011-02-03T18:32:53Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
A covert response is a [[Response]] made internal to the body, which is unobservable by external viewers.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
In a study of mental imagery, the silent visualization of an image by the subject is a covert response.<br />
<br />
===Logical Restrictions===<br />
A covert response cannot be characterized by a [[Response Modality]] since it is covert.<br />
<br />
===Comments===<br />
Covert responses may be indirectly measurable, as in the galvanic skin response after being startled by a loud noise, or EEG modification during a neural feedback study. <br />
<br />
If it is not a movement of the body, it's covert. <br />
<br />
Holding one's breath, however, is overt. <br />
<br />
BrainMap (2009) does not represent covert responses, but represents the lack of an overt response via Response Modality = None and Response Type = None.<br />
<br />
===Created Date===<br />
2010/02/01<br />
<br />
===Curator===<br />
JT and AL<br />
<br />
===Curation Status===<br />
curation complete Dec 2010<br />
<br />
===URI===<br />
<br />
===Related Concepts===<br />
*[[Response]]<br />
*[[Overt Response]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Role&diff=927Response Role2011-02-03T18:32:31Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The [[role]] of response is attributed to the overt or covert behavior which is elicited from the subject in a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the role of the response is usually filled by finger movement or button press that the subject performs in response to the stimuli. <br />
<br />
===Logical Restrictions=== <br />
A [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a response.<br />
<br />
===Comments=== <br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00134<br />
<br />
===Range Restrictions===<br />
The role can be filled by either covert or overt behaviors. <br />
<br />
===Related Concepts===<br />
*[[Overt Response]]<br />
*[[Covert Response]]<br />
*[[Response Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Role&diff=926Response Role2011-02-03T18:32:02Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The [[role]] of response is attributed to the overt or covert behavior which is elicited from the subject in a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the role of the response is usually filled by finger movement or button press that the subject performs in response to the stimuli. <br />
<br />
===Logical Restrictions=== <br />
A [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a response.<br />
<br />
===Comments=== <br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
===Range Restrictions===<br />
The role can be filled by either covert or overt behaviors. <br />
<br />
===Related Concepts===<br />
*[[Overt Response]]<br />
*[[Covert Response]]<br />
*[[Response Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Role&diff=925Response Role2011-02-03T18:31:48Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The [[role]] of response is attributed to the overt or covert behavior which is elicited from the subject in a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the role of the response is usually filled by finger movement or button press that the subject performs in response to the stimuli. <br />
<br />
===Logical Restrictions=== <br />
A [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a response.<br />
<br />
===Comments=== <br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete 2010<br />
<br />
===URI=== <br />
<br />
===Range Restrictions===<br />
The role can be filled by either covert or overt behaviors. <br />
<br />
===Related Concepts===<br />
*[[Overt Response]]<br />
*[[Covert Response]]<br />
*[[Response Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response&diff=924Response2011-02-03T18:31:27Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The class of actions in a [[Behavioral Experimental Paradigm Condition]] that make up the allowable categories of an [[Overt Response]] or [[Covert Response]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/span%23ProcessAggregate Process Aggregate]<br />
<br />
===Example=== <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a response. <br />
<br />
===Comments===<br />
BrainMap (2009) defines responses only for specific, overt responses made by the subject during the experimental condition. This is the same as [[Overt Response]].<br />
<br />
Note not used in BrainMap: [[Covert Response]].<br />
<br />
In describing the protocol (as a planned process), the response is the desired or requested activity. In describing the actual implementation of the protocol (realization of the process), it is the actual activity which occurs.<br />
<br />
Note that part of the behavior which makes up the response may be delayed; in the simplest example is a saccade as a response following a visual cue, in which the saccade is not to be made immediately but after some time interval.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver2010.owl#COGPO_00175<br />
<br />
===Related Concepts===<br />
*[[Response Role]]<br />
*[[Covert Response]]<br />
*[[Overt Response]]<br />
*[[Response Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response&diff=923Response2011-02-03T18:31:03Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The class of actions in a [[Behavioral Experimental Paradigm Condition]] that make up the allowable categories of an [[Overt Response]] or [[Covert Response]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/span%23ProcessAggregate Process Aggregate]<br />
<br />
===Example=== <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a response. <br />
<br />
===Comments===<br />
BrainMap (2009) defines responses only for specific, overt responses made by the subject during the experimental condition. This is the same as [[Overt Response]].<br />
<br />
Note not used in BrainMap: [[Covert Response]].<br />
<br />
In describing the protocol (as a planned process), the response is the desired or requested activity. In describing the actual implementation of the protocol (realization of the process), it is the actual activity which occurs.<br />
<br />
Note that part of the behavior which makes up the response may be delayed; in the simplest example is a saccade as a response following a visual cue, in which the saccade is not to be made immediately but after some time interval.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
===Related Concepts===<br />
*[[Response Role]]<br />
*[[Covert Response]]<br />
*[[Overt Response]]<br />
*[[Response Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Modality&diff=922Stimulus Modality2011-02-03T18:30:26Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The [[quality]] of the sensory perception of an explicit stimulus.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Quality Quality]<br />
<br />
===Example=== <br />
A tone that is heard by a subject in an experiment is characterized as having an auditory modality. If the subject tastes something, that explicit stimulus is characterized as having the gustatory modality. <br />
<br />
===Logical Restrictions=== <br />
Any explicit stimulus will be characterized as having at least one stimulus modality.<br />
<br />
===Comments=== <br />
In BrainMap (2009) this term refers to "the sensory mechanism through which the subject was stimulated". That is, what was used to stimulate one of their five senses while they were in the scanner?<br />
<br />
A single explicit stimulus may have multiple stimulus modalities.<br />
<br />
===Created Date=== <br />
2009/11/17 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00124<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Stimulus Modality]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Modality&diff=921Stimulus Modality2011-02-03T18:29:56Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The [[quality]] of the sensory perception of an explicit stimulus.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Quality Quality]<br />
<br />
===Example=== <br />
A tone that is heard by a subject in an experiment is characterized as having an auditory modality. If the subject tastes something, that explicit stimulus is characterized as having the gustatory modality. <br />
<br />
===Logical Restrictions=== <br />
Any explicit stimulus will be characterized as having at least one stimulus modality.<br />
<br />
===Comments=== <br />
In BrainMap (2009) this term refers to "the sensory mechanism through which the subject was stimulated". That is, what was used to stimulate one of their five senses while they were in the scanner?<br />
<br />
A single explicit stimulus may have multiple stimulus modalities.<br />
<br />
===Created Date=== <br />
2009/11/17 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Stimulus Modality]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Explicit_Stimulus&diff=920Explicit Stimulus2011-02-03T18:29:35Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
A stimulus which exists at least in part externally to the subject--e.g., a flashing checkerboard, a drop of juice, a set of digits, an electrical charge, etc.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
All the different things that can play the role of an explicit stimulus.<br />
<br />
In BrainMap (2009) this is defined as "a specific, physical stimulus presented to the subject during the experimental condition".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver2010.owl#COGPO_00177<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Explicit Stimulus]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Explicit_Stimulus&diff=919Explicit Stimulus2011-02-03T18:28:59Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
A stimulus which exists at least in part externally to the subject--e.g., a flashing checkerboard, a drop of juice, a set of digits, an electrical charge, etc.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
All the different things that can play the role of an explicit stimulus.<br />
<br />
In BrainMap (2009) this is defined as "a specific, physical stimulus presented to the subject during the experimental condition".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver2010.owl#COGPO_00177<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Explicit Stimulus]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Implicit_Stimulus&diff=918Implicit Stimulus2011-02-03T18:28:19Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
A stimulus generated internally by the subject, such as during a resting state condition, imagining a scene, or re-living a previous experience.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
This includes conditions with internal stimulation only, such as during mental imagery or calling items up from memory unaided, as well as unconstrained &quot;resting state&quot; conditions.<br />
<br />
In BrainMap (2009) this is defined as a stimulus type of "None" with a corresponding stimulus modality of "None".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver2010.owl#COGPO_00178<br />
<br />
===Related Concepts===<br />
*[[Stimulus]]<br />
*[[Stimulus Role]]<br />
*[[Explicit Stimulus]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Role&diff=917Stimulus Role2011-02-03T18:27:48Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The role of a stimulus in a behavioral experiment is attributed to the object(s) which are presented to the subject in a controlled manner in the context of the experiment.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball experiment, tones are the stimuli, which are categorized as either non-target (low frequency) or target (high-frequency) tones. The distinction of whether the stimulus is a target or non-target is qualified by the stimulus role. <br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments===<br />
Not all stimuli have more specific roles than just being the stimulus; in these cases, the stimulus is simply a generic stimulus. A stimulus may also have experiment-specific import to the subject, as reflected in playing the role of a reward or feedback.<br />
<br />
We define a stimulus as a role so that ontologies of tones, lights, pictures, and other "things" can be imported as references to the objects which play the role of stimulus in a given experimental condition.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00135<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Stimulus Role]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus&diff=916Stimulus2011-02-03T18:27:13Z<p>Turner: /* URI */</p>
<hr />
<div>===Definition===<br />
The stimulus is the external or internal object or set of objects which is intended to generate either an [[Overt Response]] or [[Covert Response]] in the subject as part of a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23ObjectAggregate Object Aggregate]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the role of the stimulus is usually filled by the auditory tone or cluster of tones that are presented to the subject. <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a stimulus. <br />
<br />
===Comments===<br />
A stimulus is categorized as either an [[Explicit Stimulus]] or [[Implicit Stimulus]]. An [[Explicit Stimulus]] is characterized by its [[Stimulus Modality]].<br />
<br />
Original suggestions included: "The occurrent or continuant (i.e., the thingie) which elicits activity from the subject in the experiment". Its suggested definition in other fields includes:<br />
<br />
*Anything that may have an impact or influence on a system <br />
*(physiology) Something external that elicits or influences a physiological or psychological activity or response. <br />
*(psychology) Anything effectively impinging upon any of the sensory apparatuses of a living organism, including physical phenomena both internal and external to the body. <br />
*Anything that induces a person to take action <br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI===<br />
http://www.cogpo.org/ontologies/CogPOver1.owl#COGPO_00122<br />
<br />
===Related Concepts===<br />
*[[Stimulus Role]]<br />
*[[Implicit Stimulus]]<br />
*[[Explicit Stimulus]]<br />
*[[Stimulus Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Implicit_Stimulus&diff=915Implicit Stimulus2011-02-03T18:04:27Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
A stimulus generated internally by the subject, such as during a resting state condition, imagining a scene, or re-living a previous experience.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
This includes conditions with internal stimulation only, such as during mental imagery or calling items up from memory unaided, as well as unconstrained &quot;resting state&quot; conditions.<br />
<br />
In BrainMap (2009) this is defined as a stimulus type of "None" with a corresponding stimulus modality of "None".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
<br />
===Related Concepts===<br />
*[[Stimulus]]<br />
*[[Stimulus Role]]<br />
*[[Explicit Stimulus]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Role&diff=914Stimulus Role2011-02-03T18:04:06Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The role of a stimulus in a behavioral experiment is attributed to the object(s) which are presented to the subject in a controlled manner in the context of the experiment.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball experiment, tones are the stimuli, which are categorized as either non-target (low frequency) or target (high-frequency) tones. The distinction of whether the stimulus is a target or non-target is qualified by the stimulus role. <br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments===<br />
Not all stimuli have more specific roles than just being the stimulus; in these cases, the stimulus is simply a generic stimulus. A stimulus may also have experiment-specific import to the subject, as reflected in playing the role of a reward or feedback.<br />
<br />
We define a stimulus as a role so that ontologies of tones, lights, pictures, and other "things" can be imported as references to the objects which play the role of stimulus in a given experimental condition.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Stimulus Role]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus&diff=913Stimulus2011-02-03T18:03:43Z<p>Turner: /* Curation Status */</p>
<hr />
<div>===Definition===<br />
The stimulus is the external or internal object or set of objects which is intended to generate either an [[Overt Response]] or [[Covert Response]] in the subject as part of a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23ObjectAggregate Object Aggregate]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the role of the stimulus is usually filled by the auditory tone or cluster of tones that are presented to the subject. <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of a stimulus. <br />
<br />
===Comments===<br />
A stimulus is categorized as either an [[Explicit Stimulus]] or [[Implicit Stimulus]]. An [[Explicit Stimulus]] is characterized by its [[Stimulus Modality]].<br />
<br />
Original suggestions included: "The occurrent or continuant (i.e., the thingie) which elicits activity from the subject in the experiment". Its suggested definition in other fields includes:<br />
<br />
*Anything that may have an impact or influence on a system <br />
*(physiology) Something external that elicits or influences a physiological or psychological activity or response. <br />
*(psychology) Anything effectively impinging upon any of the sensory apparatuses of a living organism, including physical phenomena both internal and external to the body. <br />
*Anything that induces a person to take action <br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
curation complete Dec 2010<br />
<br />
===URI=== <br />
<br />
===Related Concepts===<br />
*[[Stimulus Role]]<br />
*[[Implicit Stimulus]]<br />
*[[Explicit Stimulus]]<br />
*[[Stimulus Modality]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Instructions&diff=912Instructions2011-02-03T17:01:07Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
The instructions are the explicit directions that are given to a subject to guide their behavioral [[Response]] during a [[Behavioral Experimental Paradigm Condition]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO:[http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23GenericallyDependentContinuant Generically Dependent Continuant]<br />
<br />
IAO: Generically Dependent Continuant -> Information Content Entity -> Directive Information Entity -> Action Specification<br />
<br />
===Example=== <br />
<br />
===Logical Restrictions=== <br />
An experimental [[Behavioral Experimental Paradigm Condition]] requires something that plays the role of the instructions. <br />
<br />
===Comments===<br />
Instructions serve the function that they lay out what the response behaviors should be for any set of stimuli in a condition.<br />
<br />
Formulated as a command. If a subject was instructed to read words aloud, the instruction is "Read" and the response type is "Speech"; rather than "Speak" as the instruction.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Instructions]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Modality&diff=911Response Modality2011-02-03T16:56:57Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
The class of body parts through which the subject makes an [[Overt Response]].<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23FiatObjectPart Fiat Object Part]<br />
<br />
===Example=== <br />
In an auditory oddball paradigm, the overt response can be a finger press for the oddball tones, and the response modality is the hand.<br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments=== <br />
In BrainMap (2009) response modality is "A body part which is used to perform the response activity".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
*[[Arm]]<br />
*[[Eye]]<br />
*[[Face]]<br />
*[[Foot]]<br />
*[[Hand]]<br />
*[[Leg]]<br />
*[[Mouth]]<br />
*[[Pelvis]]<br />
*[[Shoulder]]<br />
*[[Torso]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Covert_Response&diff=910Covert Response2011-02-03T16:52:31Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
A covert response is a [[Response]] made internal to the body, which is unobservable by external viewers.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
In a study of mental imagery, the silent visualization of an image by the subject is a covert response.<br />
<br />
===Logical Restrictions===<br />
A covert response cannot be characterized by a [[Response Modality]] since it is covert.<br />
<br />
===Comments===<br />
Covert responses may be indirectly measurable, as in the galvanic skin response after being startled by a loud noise, or EEG modification during a neural feedback study. <br />
<br />
If it is not a movement of the body, it's covert. <br />
<br />
Holding one's breath, however, is overt. <br />
<br />
BrainMap (2009) does not represent covert responses, but represents the lack of an overt response via Response Modality = None and Response Type = None.<br />
<br />
===Created Date===<br />
2010/02/01<br />
<br />
===Curator===<br />
JT and AL<br />
<br />
===Curation Status===<br />
pending final vetting<br />
<br />
===URI===<br />
<br />
===Related Concepts===<br />
*[[Response]]<br />
*[[Overt Response]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Overt_Response&diff=909Overt Response2011-02-03T16:52:04Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
An overt response is a [[Response]] made with a body part that is externally observable by others.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
[http://wiki.cogpo.org/index.php?title=Response Response]<br />
<br />
===Example===<br />
The tapping of fingers as requested during a finger-tapping task is an overt response.<br />
<br />
===Logical Restrictions===<br />
An overt response is characterized by a [[Response Modality]].<br />
<br />
===Comments===<br />
Responses which do not include movement of a body part (e.g., changes in galvanic skin response in response to an emotional stimulus) are considered covert.<br />
<br />
===Created Date===<br />
2010/11/06<br />
<br />
===Curator===<br />
AL and JT<br />
<br />
===Curation Status===<br />
pending final vetting<br />
<br />
===URI===<br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Overt Response]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Role&diff=908Stimulus Role2011-02-03T16:45:34Z<p>Turner: /* Comments */</p>
<hr />
<div>===Definition===<br />
The role of a stimulus in a behavioral experiment is attributed to the object(s) which are presented to the subject in a controlled manner in the context of the experiment.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23Role Role]<br />
<br />
===Example=== <br />
In an auditory oddball experiment, tones are the stimuli, which are categorized as either non-target (low frequency) or target (high-frequency) tones. The distinction of whether the stimulus is a target or non-target is qualified by the stimulus role. <br />
<br />
===Logical Restrictions=== <br />
<br />
===Comments===<br />
Not all stimuli have more specific roles than just being the stimulus; in these cases, the stimulus is simply a generic stimulus. A stimulus may also have experiment-specific import to the subject, as reflected in playing the role of a reward or feedback.<br />
<br />
We define a stimulus as a role so that ontologies of tones, lights, pictures, and other "things" can be imported as references to the objects which play the role of stimulus in a given experimental condition.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Stimulus Role]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Explicit_Stimulus&diff=907Explicit Stimulus2011-02-03T16:42:14Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
A stimulus which exists at least in part externally to the subject--e.g., a flashing checkerboard, a drop of juice, a set of digits, an electrical charge, etc.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
All the different things that can play the role of an explicit stimulus.<br />
<br />
In BrainMap (2009) this is defined as "a specific, physical stimulus presented to the subject during the experimental condition".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Explicit Stimulus]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Implicit_Stimulus&diff=906Implicit Stimulus2011-02-03T16:41:40Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
A stimulus generated internally by the subject, such as during a resting state condition, imagining a scene, or re-living a previous experience.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
Stimulus: http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
This includes conditions with internal stimulation only, such as during mental imagery or calling items up from memory unaided, as well as unconstrained &quot;resting state&quot; conditions.<br />
<br />
In BrainMap (2009) this is defined as a stimulus type of "None" with a corresponding stimulus modality of "None".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
<br />
===Related Concepts===<br />
*[[Stimulus]]<br />
*[[Stimulus Role]]<br />
*[[Explicit Stimulus]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Implicit_Stimulus&diff=905Implicit Stimulus2011-02-03T16:41:18Z<p>Turner: /* Parent Entity */</p>
<hr />
<div>===Definition===<br />
A stimulus generated internally by the subject, such as during a resting state condition, imagining a scene, or re-living a previous experience.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
http://wiki.cogpo.org/index.php?title=Stimulus<br />
<br />
===Comments===<br />
This includes conditions with internal stimulation only, such as during mental imagery or calling items up from memory unaided, as well as unconstrained &quot;resting state&quot; conditions.<br />
<br />
In BrainMap (2009) this is defined as a stimulus type of "None" with a corresponding stimulus modality of "None".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
<br />
===Related Concepts===<br />
*[[Stimulus]]<br />
*[[Stimulus Role]]<br />
*[[Explicit Stimulus]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Explicit_Stimulus&diff=904Explicit Stimulus2011-02-03T16:40:16Z<p>Turner: /* Definition */</p>
<hr />
<div>===Definition===<br />
A stimulus which exists at least in part externally to the subject--e.g., a flashing checkerboard, a drop of juice, a set of digits, an electrical charge, etc.<br />
<br />
===Definition Source===<br />
JT and AL<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: [http://jowl.ontologyonline.org/bfo.html?owlClass=http%3A//www.ifomis.org/bfo/1.1/snap%23ObjectAggregate Object Aggregate] <br />
<br />
===Comments===<br />
All the different things that can play the role of an explicit stimulus.<br />
<br />
In BrainMap (2009) this is defined as "a specific, physical stimulus presented to the subject during the experimental condition".<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT and AL<br />
<br />
===Curation Status=== <br />
pending final vetting <br />
<br />
===URI=== <br />
<br />
===Sub-Classes===<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::Explicit Stimulus]]<br />
|format=table<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Template:Condition_Template&diff=751Template:Condition Template2010-12-07T21:17:26Z<p>Turner: /* Comments */</p>
<hr />
<div>[[Category:Condition Edit]]<br />
<noinclude><br />
This is the "Condition Template" template.<br />
It should be called in the following format:<br />
<pre><br />
{{Condition Template<br />
|Definition=<br />
|Definition Source=<br />
|Synonyms=<br />
|Parent Entity=<br />
|Example=<br />
|Logical Restrictions=<br />
|Comments=<br />
|Created Date=<br />
|Curator=<br />
|Curation Status=<br />
|URI=<br />
|Sub-Classes=<br />
}}<br />
</pre><br />
Edit the page to see the template text.<br />
</noinclude><includeonly><br />
{| class="wikitable"<br />
===Definition===<br />
| [[Definition::{{{Definition|}}}]]<br />
|-<br />
===Definition Source===<br />
| [[Definition Source::{{{Definition Source|}}}]]<br />
|-<br />
===Synonyms===<br />
| [[Synonyms::{{{Synonyms|}}}]]<br />
|-<br />
===Parent Entity===<br />
| [[Parent Entity::{{{Parent Entity|}}}]]<br />
|-<br />
===Example===<br />
| [[Example::{{{Example|}}}]]<br />
|-<br />
===Logical Restrictions===<br />
| [[Logical Restrictions::{{{Logical Restrictions|}}}]]<br />
|-<br />
===Comments===<br />
| [[Comments::{{{Comments|}}}]]<br />
Not all stimuli have more specific roles, such as being a target or a reward.<br />
|-<br />
<br />
===Created Date===<br />
| [[Created Date::{{{Created Date|}}}]]<br />
|-<br />
===Curator===<br />
| [[Curator::{{{Curator|}}}]]<br />
|-<br />
===Curation Status===<br />
| [[Curation Status::{{{Curation Status|}}}]]<br />
|-<br />
===URI===<br />
| [[URI::{{{URI|}}}]]<br />
|-<br />
===Sub-Classes===<br />
| [[Sub-Classes::{{{Sub-Classes|}}}]]<br />
{{#ask: [[Category:Condition Edit]] [[Parent Entity::{{FULLPAGENAME}}]]<br />
| format=ul<br />
}}<br />
|}<br />
</includeonly></div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Role&diff=348Response Role2010-03-08T23:32:37Z<p>Turner: /* Relations to other CogPo Terms */</p>
<hr />
<div>===Definition===<br />
The role of response in an experimental condition is played by the behavior which is elicited from the subject by the stimulus in that experimental condition.<br />
<br />
===Definition Source===<br />
JT<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: role<br />
<br />
===Example=== <br />
<br />
In an auditory oddball paradigm, the role of the response is usually filled by finger movement or button press that the subject performs in response to the stimuli. <br />
<br />
===Relations to other CogPo Terms=== <br />
An experimental condition requires something that plays the role of a stimulus.<br />
Range Restrictions on various overt and covert responses are listed below.<br />
An Overt Response always uses or has a [[Response Modality]].<br />
<br />
===UsageNote=== <br />
<br />
BrainMap (2009) uses Response only for specific, overt responses made by the subject during the experimental condition. They do not include imagined movement, silent speech, or other covert responses. This is the same as [[Overt Response]]. Note also (not used in BrainMap): [[Covert Response]]<br />
<br />
===Comments=== <br />
<br />
In describing the protocol (as a planned process), the response is the desired or requested activity. In describing the actual implementation of the protocol (realization of the process), it is the actual activity which occurs.<br />
<br />
Note that part of the behavior which makes up the response may be delayed; in the simplest example is a saccade as a response following a visual cue, in which the saccade is not to be made immediately but after some time interval.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT <br />
<br />
===Curation Status=== <br />
pending_final_vetting <br />
<br />
===URI=== <br />
<br />
===Subclasses===<br />
[[Overt Response]]<br />
<br />
[[Covert Response]]<br />
<br />
===Range Restrictions===<br />
<br />
The role can be filled by either covert or overt behaviors. <br />
<br />
*Technically these are all instances of overt responses... <br />
<br />
*[[Button Press]]<br />
*[[Flexion/Extension]]<br />
*[[Saccades]]<br />
*[[Speech]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Response_Role&diff=347Response Role2010-03-08T23:32:08Z<p>Turner: /* Relations to other CogPo Terms */</p>
<hr />
<div>===Definition===<br />
The role of response in an experimental condition is played by the behavior which is elicited from the subject by the stimulus in that experimental condition.<br />
<br />
===Definition Source===<br />
JT<br />
<br />
===Synonyms===<br />
<br />
===Parent Entity===<br />
BFO: role<br />
<br />
===Example=== <br />
<br />
In an auditory oddball paradigm, the role of the response is usually filled by finger movement or button press that the subject performs in response to the stimuli. <br />
<br />
===Relations to other CogPo Terms=== <br />
An experimental condition requires something that plays the role of a stimulus.<br />
Range Restrictions on various overt and covert responses are listed below.<br />
The Response always uses or has a [[Response Modality]].<br />
<br />
===UsageNote=== <br />
<br />
BrainMap (2009) uses Response only for specific, overt responses made by the subject during the experimental condition. They do not include imagined movement, silent speech, or other covert responses. This is the same as [[Overt Response]]. Note also (not used in BrainMap): [[Covert Response]]<br />
<br />
===Comments=== <br />
<br />
In describing the protocol (as a planned process), the response is the desired or requested activity. In describing the actual implementation of the protocol (realization of the process), it is the actual activity which occurs.<br />
<br />
Note that part of the behavior which makes up the response may be delayed; in the simplest example is a saccade as a response following a visual cue, in which the saccade is not to be made immediately but after some time interval.<br />
<br />
===Created Date=== <br />
2009/11/12 <br />
<br />
===Curator=== <br />
JT <br />
<br />
===Curation Status=== <br />
pending_final_vetting <br />
<br />
===URI=== <br />
<br />
===Subclasses===<br />
[[Overt Response]]<br />
<br />
[[Covert Response]]<br />
<br />
===Range Restrictions===<br />
<br />
The role can be filled by either covert or overt behaviors. <br />
<br />
*Technically these are all instances of overt responses... <br />
<br />
*[[Button Press]]<br />
*[[Flexion/Extension]]<br />
*[[Saccades]]<br />
*[[Speech]]</div>Turnerhttp://wiki.cogpo.org/index.php?title=Behavioral_Experimental_Paradigm&diff=346Behavioral Experimental Paradigm2010-03-08T23:30:57Z<p>Turner: </p>
<hr />
<div>{{Condition Template<br />
|Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several [[Condition]]s, during which measurements are made. The comparison of measurements across conditions and/or subjects creates the experimental data or analysis.<br />
|Definition Source=JT<br />
|Synonyms=http://neurolex.org/wiki/Category:Behavioral_paradigm<br />
|Parent Entity=BFO: process_aggregate<br />
|Relations to other CogPo Terms=Behavioral paradigms have (have_part) several [[Condition]]s, which are defined by their combinations of [[Stimulus]], [[Instructions]], and [[Response]].<br />
|UsageNote=The different paradigm classes in BrainMap are groups of behavioral paradigms.<br />
|Created Date=2010/03/08<br />
|Curator=JT<br />
|Curation Status=pending_final_vetting<br />
|Related Concepts=Instances<br />
*[[Action Observation]]<br />
*[[Delayed Match To Sample]]<br />
*[[Encoding]]<br />
*[[Episodic Recall]]<br />
*[[Oddball Discrimination]]<br />
*[[Stroop]]<br />
*[[Task Switching]]<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Behavioral_Experimental_Paradigm&diff=345Behavioral Experimental Paradigm2010-03-08T23:28:06Z<p>Turner: </p>
<hr />
<div>{{Condition Template<br />
|Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several [[Condition]]s, during which measurements are made. The comparison of measurements across conditions and/or subjects creates the experimental data or analysis.<br />
|Definition Source=JT<br />
|Synonyms=http://neurolex.org/wiki/Category:Behavioral_paradigm <br />
|Parent Entity=BFO: process_aggregate<br />
|Relations to other CogPo Terms=Behavioral paradigms have several Conditions, which are defined by their combinations of Stimuli, Instructions, and Responses.<br />
|UsageNote=The different paradigm classes in BrainMap are groups of behavioral paradigms.<br />
|Created Date=2010/03/08<br />
|Curator=JT<br />
|Curation Status=pending_final_vetting<br />
|Related Concepts=Instances<br />
*[[Action Observation]]<br />
*[[Delayed Match To Sample]]<br />
*[[Encoding]]<br />
*[[Episodic Recall]]<br />
*[[Oddball Discrimination]]<br />
*[[Stroop]]<br />
*[[Task Switching]]<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Behavioral_Experimental_Paradigm&diff=343Behavioral Experimental Paradigm2010-03-08T23:23:16Z<p>Turner: </p>
<hr />
<div>{{Condition Template<br />
|Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several [[Condition]]s, during which measurements are made. The comparison of measurements across conditions and/or subjects creates the experimental data or analysis. <br />
|Definition Source=JT<br />
|Parent Entity=BFO: process_aggregate<br />
|Relations to other CogPo Terms=Behavioral paradigms have several Conditions, which are defined by their combinations of Stimuli, Instructions, and Responses.<br />
|UsageNote=The different paradigm classes in BrainMap are groups of behavioral paradigms.<br />
|Created Date=2010/03/08<br />
|Curator=JT<br />
|Curation Status=pending_final_vetting<br />
|Related Concepts=Instances<br />
*[[Action Observation]]<br />
*[[Delayed Match To Sample]]<br />
*[[Encoding]]<br />
*[[Episodic Recall]]<br />
*[[Oddball Discrimination]]<br />
*[[Stroop]]<br />
*[[Task Switching]]<br />
<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Behavioral_Experimental_Paradigm&diff=342Behavioral Experimental Paradigm2010-03-08T23:22:33Z<p>Turner: </p>
<hr />
<div>{{Condition Template<br />
|Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several [[Condition]]s, during which measurements are made. The comparison of measurements across conditions and/or subjects creates the experimental data or analysis. <br />
|Definition Source=JT<br />
|Parent Entity=BFO: process_aggregate<br />
|Relations to other CogPo Terms=Behavioral paradigms have several Conditions, which are defined by their combinations of Stimuli, Instructions, and Responses.<br />
|UsageNote=The different paradigm classes in BrainMap are groups of behavioral paradigms.<br />
|Created Date=2010/03/08<br />
|Curator=JT<br />
|Curation Status=pending_final_vetting<br />
|Related Concepts<br />
====Instances===<br />
*[[Action Observation]]<br />
*[[Delayed Match To Sample]]<br />
*[[Encoding]]<br />
*[[Episodic Recall]]<br />
*[[Oddball Discrimination]]<br />
*[[Stroop]]<br />
*[[Task Switching]]<br />
<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=Behavioral_Experimental_Paradigm&diff=341Behavioral Experimental Paradigm2010-03-08T23:21:52Z<p>Turner: Created page with '{{Condition Template |Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several Conditions, …'</p>
<hr />
<div>{{Condition Template<br />
|Definition=The Behavioral Paradigm is the experimental paradigm to elicit behavior from the subject in the experiment. It comprises several [[Condition]]s, during which measurements are made. The comparison of measurements across conditions and/or subjects creates the experimental data or analysis. <br />
|Definition Source=JT<br />
|Parent Entity=BFO: process_aggregate<br />
|Relations to other CogPo Terms=Behavioral paradigms have several Conditions, which are defined by their combinations of Stimuli, Instructions, and Responses.<br />
|UsageNote=The different paradigm classes in BrainMap are groups of behavioral paradigms.<br />
|Created Date=2010/03/08<br />
|Curator=JT<br />
|Curation Status=pending_final_vetting<br />
|Related Concepts====Instances===<br />
*[[Action Observation]]<br />
*[[Delayed Match To Sample]]<br />
*[[Encoding]]<br />
*[[Episodic Recall]]<br />
*[[Oddball Discrimination]]<br />
*[[Stroop]]<br />
*[[Task Switching]]<br />
<br />
}}</div>Turnerhttp://wiki.cogpo.org/index.php?title=File:CogPOOver2.jpg&diff=304File:CogPOOver2.jpg2010-02-11T18:43:07Z<p>Turner: uploaded a new version of "File:CogPOOver2.jpg"</p>
<hr />
<div></div>Turnerhttp://wiki.cogpo.org/index.php?title=File:CogPOOver2.jpg&diff=303File:CogPOOver2.jpg2010-02-11T18:41:10Z<p>Turner: uploaded a new version of "File:CogPOOver2.jpg"</p>
<hr />
<div></div>Turnerhttp://wiki.cogpo.org/index.php?title=Main_Page&diff=302Main Page2010-02-11T18:39:00Z<p>Turner: </p>
<hr />
<div>Welcome to the CogPO Wiki!<br />
<br />
Here is where we will come to a consensus on the initial terms that will be included in CogPO. We will start by defining the terms associated with the [[BrainMap Taxonomy]]. Also taken from BrainMap are entries that correspond to [[Paradigm Class]] and [[Behavioral Domain]].<br />
<br />
In creating an ontology of cognitive paradigms we aim to decompose each condition into:<br />
<br />
*[[Stimulus]]<br />
*[[Stimulus Modality]]<br />
*[[Response]]<br />
*[[Response Modality]]<br />
*[[Instructions]]<br />
<br />
For more information, please see the [[Aims of the CogPO Project]].<br />
The initial representation of the domain is as follows, though it will be modified as we flesh this out:<br />
[[image:CogPOOver2.jpg]]<br />
<br />
==Browsing CogPO==<br />
Coming as soon as it's available: The [[CogPORoots|top level overview]] of the CogPO structure.<br />
The BrainMap taxonomy terms will be rolled into or linked to wherever possible.<br />
<br />
==CogPO Policies==<br />
<br />
Draft 1.0, 10/07/2009<br />
<br />
The whole point of having a Wiki is to allow concepts to be identified and fleshed out collaboratively before becoming "official." A concept is entered into the official CogPO Protege/OWL files when it's been hammered out a bit on the Wiki and shows no sign of going away. Definitions and other properties can change once the concept is entered into CogPO, of course. But the general ideas are as follows:<br />
<br />
# Any member of the research community can create new concepts or edit concepts. Create a log in and start making suggestions. All edits are reviewed by CogPO curators, who reserve the right to undo them if it is not in keeping with best practices or ontological clarity.<br />
# While suggesting a new concept is as simple as making a new Wiki page, a new concept MUST include the required properties noted below before it will be considered for inclusion in CogPO. Optional properties are also listed in the Annotation Properties file.<br />
# Please use the Search box before you make a new concept to identify if the term or a related term has already been given a wiki page. We also recommend searching NeuroLex, the CogAtlas, and the NCBO Bioportal for related terms so you can see what concepts other experts have created that might be what you need.<br />
# You can also suggest new relationships. The guidelines for defining relationships are coming soon.<br />
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<b>Defining a concept in CogPO: required properties </b><br />
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In keeping with best practices from NeuroLex, the Neural ElectroMagnetic Ontology (NEMO), and others, concepts in CogPO must have the following annotation properties defined:<br />
*COGPO_annotation_properties:definition – A natural language definition that adheres to Aristotelian constraints (A is a B that C's). Equivalent to core:definition. <i>Example:</i> The auditory modality is a sensory modality that involves the auditory nervous system.<br />
*COGPO_annotation_properties:preferredlabel -- An underscore-delimited, human-readable label for a concept. Equivalent to rdfs:label and core:prefLabel. this is the most common way for humans to refer to the concept. <i>Example:</i> The preferred label for the concept "Auditory Modality" is "Auditory_Modality". <br />
*COGPO_annotation_properties:hasURI -- This property defines the CogPO URI for a concept. The URI is a non-human-readable label that also provides a stable web address for accessing the concept. For an imported term, the URI should be the source ontology URI (if possible?). MIREOT recommends that the source term URI be included specifically. This only is filled in when the concept is curated. <br />
*COGPO_annotation_properties:createdDate -- [YYYY-MM-DD] The date when the current concept was created. Equivalent to the same term in NeuroLex.<br />
*COGPO_annotation_properties:curator -- This property defines the CogPO ontology curators who've contributed to the definition of a class. In the case of multiple curators, the individual curator name may also be associated with the definition, if that person was primarily responsible for it.<br />
*COGPO_annotation_properties:hasCurationStatus -- This provides specific info on the level of curation a given class has received, and is specifically designed to promote automated reporting on the status of classes in an ontology. It is a type of skos_editorial_note. For a full listing of the possible values for Curation Status, see the full COGPO Annotation Properties [[Media:CogPOAnnotationPropertiesOct2009.pdf]]. <br />
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Also required are: <br />
# the direct superclass concept, either from within CogPO or from another ontology. <i>Example:</i> The superclass for Auditory_Modality is Sensory_Modality.<br />
# the most granular concept from BFO that is applicable. Everything is either a <i>continuant</i> or an <i>occurrent</i>, but it would be better to suggest a branch a little lower in the BFO tree than that top level. The curators will also do their best to fill this term in. <br />
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===Recent Tasks===<br />
*Logo? (Angie)<br />
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*Add details to website (Angie)<br />
**short description of PNAS paper as a motivation? (Jess says yes)<br />
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*Begin discussion of some concepts/information with BFO, Neurolex (Jess)<br />
**e.g., sound and tones, various stimulus types and response types (behaviors)<br />
**save stimulus and response roles for smaller discussions<br />
**Have defined necessary properties for a term to be considered complete in CogPO<br />
**Defining Experimental condition as the first high-level concept.<br />
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*Begin discussion with Jeff et al. about what it would take to use NIF to query BrainMap and HID using CogPO terms (and how much of that can be done before the ontology is complete) (Jess)<br />
** NIF people working on this, Jess to touch base with them next week (9/1/09)<br />
** Now having regular calls with NIF/NeuroLex every other Monday.<br />
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*Work out an experiment model with KFED and OBI (Jess)<br />
**Can discuss stimulus and response roles, modality qualities etc. here<br />
**Working on this: Have downloaded OBI, made contact with OBI people, joined the OBI-developers mailing list, etc. <br />
**have a first experimental model in KFED<br />
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*Submit book proposal: Done and approved. Now we have to write it.</div>Turnerhttp://wiki.cogpo.org/index.php?title=File:CogPOOver2.jpg&diff=301File:CogPOOver2.jpg2010-02-11T18:38:31Z<p>Turner: </p>
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<div></div>Turnerhttp://wiki.cogpo.org/index.php?title=Stimulus_Role&diff=300Stimulus Role2010-02-02T20:18:49Z<p>Turner: /* Related Concepts */</p>
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<div>===Definition===<br />
The [[role]] of a stimulus in a behavioral experiment is attributed to the [[processual entity]] or [[continuant]] which elicits activity from the subject in the context of the experiment.<br />
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===Definition Source===<br />
JT<br />
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===Synonyms===<br />
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===Parent Entity===<br />
BFO: role<br />
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===Example=== <br />
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In an auditory oddball paradigm, the role of the stimulus is usually filled by the auditory tone or clusters that are played to the subject. <br />
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===Relations to other CogPo Terms=== <br />
An experimental condition requires something that plays the role of a stimulus. <br />
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===UsageNote=== <br />
In BrainMap (2009) this is similar to "stimulus type" which is defined as "A specific, physical stimulus presented to the subject during the experimental condition." All the different things that can play the role of a stimulus are a stimulus type.<br />
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===Comments=== <br />
Original suggestions included: "The [[occurrent]] or continuant (i.e., the thingie) which elicits activity from the subject in the experiment." Its suggested definition in other fields includes:<br />
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*Anything that may have an impact or influence on a system <br />
*(physiology) Something external that elicits or influences a physiological or psychological activity or response. <br />
*(psychology) Anything effectively impinging upon any of the sensory apparatuses of a living organism, including physical phenomena both internal and external to the body. <br />
*Anything that induces a person to take action <br />
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However, we define it as a role so that ontologies of tones, lights, pictures, and other "things" etc. can be imported as references to the objects which play the role of stimulus in a given experimental condition. <br />
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===Created Date=== <br />
2009/11/12 <br />
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===Curator=== <br />
JT <br />
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===Curation Status=== <br />
pending_final_vetting <br />
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===URI=== <br />
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===Related Concepts===<br />
i.e., these are other items which can play the role of a stimulus<br />
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*[[Tone]]<br />
*[[Tone Clusters]]<br />
*[[Words]]<br />
*[[Faces]]<br />
*[[False Fonts]]<br />
*[[Heat]]<br />
*[[Odor]]</div>Turner