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  <page>
    <title>Main Page</title>
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    <revision>
      <id>15128</id>
      <parentid>15127</parentid>
      <timestamp>2015-07-22T20:02:44Z</timestamp>
      <contributor>
        <username>Ueckera</username>
        <id>4</id>
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      <text xml:space="preserve" bytes="7123">Welcome to the CogPO Wiki!

Here is where we will come to a consensus on the initial terms that will be included in our ontology of cognitive paradigms.  Our starting point are the terms associated with the [[BrainMap Taxonomy]].

In CopPO, a cognitive [[paradigm]] is represented by the concept of [[Behavioral Experimental Paradigm]]. Each [[Behavioral Experimental Paradigm]] is characterized by one or more [[Behavioral Experimental Paradigm Condition]]s and [[Behavioral Experimental Paradigm Condition Contrast]]s.

We aim to decompose each condition into its corresponding stimulus, response, and instructions:

*[[Stimulus]]
**[[Stimulus Role]]
**[[Implicit Stimulus]]
**[[Explicit Stimulus]]
***[[Stimulus Modality]]
*[[Response]]
**[[Response Role]]
**[[Covert Response]]
**[[Overt Response]]
***[[Response Modality]]
*[[Instructions]]

Each of these terms is categorized by a set of classes, which will increase in size as CogPO evolves.

===Stimulus Modality===
{|
|-
|  width=&quot;200&quot; | [[Auditory Modality]]
|  width=&quot;200&quot; | [[Interoceptive Modality]]
|  width=&quot;200&quot; | [[Tactile Modality]]
|-
| [[Gustatory Modality]]||[[Olfactory Modality]]||[[Visual Modality]]
|}

===Explicit Stimulus===
{|
|-
|  width=&quot;200&quot; | [[3D Objects]]
|  width=&quot;200&quot; | [[Fixation Point]]
|  width=&quot;200&quot; | [[Painful Stimulation]]
|-
| [[Abstract Patterns]]||[[Flashing Checkerboard]]||[[Points of Light]]
|-
| [[Acupuncture]]||[[Food]]||[[Pseudowords]]
|-
| [[Asian Characters]]||[[Fractals]]||[[Random Dots]]
|-
| [[Braille Dots]]||[[Heat]]||[[Reversed Speech]]
|-
| [[Breathable Gas]]||[[Infrared Laser]]||[[Shapes]]
|-
| [[Chord Sequences]]||[[Infusion]]||[[Syllables]]
|-
| [[Clicks]]||[[Letters]]||[[Symbols]]
|-
| [[Digits]]||[[Music]]||[[TMS]]
|-
| [[Electrical Stimulation]]||[[Noise]]||[[Tactile Stimulation]]
|-
| [[Eye Puffs]]||[[Nonverbal Vocal Sounds]]||[[Tones]]
|-
| [[Faces]]||[[Nonvocal Sounds]]||[[Vibratory Stimulation]]
|-
| [[False Fonts]]||[[Odor]]||[[Words]]
|-
| [[Film Clips]]||[[Pictures]]
|}

===Stimulus Role===
{|
|-
|  width=&quot;200&quot; | [[Feedback]]
|  width=&quot;200&quot; | [[Non-Target]]
|  width=&quot;200&quot; | [[Reward]]
|-
| [[Target]]
|
|}

===Response Modality===
{|
|-
|  width=&quot;200&quot; | [[Arm]]
|  width=&quot;200&quot; | [[Hand]]
|  width=&quot;200&quot; | [[Pelvis]]
|-
| [[Eye]]||[[Leg]]||[[Shoulder]]
|-
| [[Face]]||[[Mouth]]||[[Torso]]
|-
| [[Foot]]||
|}

===Overt Response===
{| {{table}}
|-
|  width=&quot;200&quot; | [[Blink]]
|  width=&quot;200&quot; | [[Finger Tapping]]
|  width=&quot;200&quot; | [[Saccades]]
|-
| [[Breathe Response]]||[[Flexion or Extension]]||[[Smile Response]]
|-
| [[Breath-Hold Response]]||[[Grasp]]||[[Speech]]
|-
| [[Button Press]]||[[Manipulate]]||[[Swallow]]
|-
| [[Draw]]||[[Micturate]]||[[Whistle]]
|-
| [[Drink]]||[[Point]]|||[[Write]]
|}

===Instructions===
{|
|-
|  width=&quot;200&quot; | [[Attend]]
|  width=&quot;200&quot; | [[Fixate]]
|  width=&quot;200&quot; | [[Recall]]
|-
| [[Breathe Instructions]]||[[Generate]]||[[Repeat]]
|-
| [[Breath-Hold Instructions]]||[[Imagine]]||[[Rest]]
|-
| [[Count]]||[[Move]]||[[Sing]]
|-
| [[Detect]]||[[Name]]||[[Smile Instructions]]
|-
| [[Discriminate]]||[[Read]]||[[Track]]
|-
| [[Encode]]
|}

===Paradigm Classes===
Currently, CogPO has defined 84 classes of paradigms:

#[[Action Observation Paradigm]]
#[[Acupuncture Paradigm]]
#[[Anti-Saccades Paradigm]]
#[[Braille Reading Paradigm]]
#[[Breath-Holding Paradigm]]
#[[Chewing or Swallowing Paradigm]]
#[[Classical Conditioning Paradigm]]
#[[Counting or Calculation Paradigm]]
#[[Cued Explicit Recognition Paradigm]]
#[[Deception Task Paradigm]]
#[[Deductive Reasoning Paradigm]]
#[[Delay Discounting Task Paradigm]]
#[[Delayed Match To Sample Paradigm]]
#[[Delayed Non Match To Sample Paradigm]]
#[[Divided Auditory Attention Paradigm]]
#[[Drawing Paradigm]]
#[[Eating or Drinking Paradigm]]
#[[Encoding Paradigm]]
#[[Episodic Recall Paradigm]]
#[[Face Monitor or Discrimination Paradigm]]
#[[Film Viewing Paradigm]]
#[[Finger Tapping Paradigm]]
#[[Fixation Paradigm]]
#[[Flanker Task Paradigm]]
#[[Flashing Checkerboard Paradigm]]
#[[Flexion or Extension Paradigm]]
#[[Free Word List Recall Paradigm]]
#[[Go/No-Go Paradigm]]
#[[Grasping Paradigm]]
#[[Imagined Movement Paradigm]]
#[[Imagined Objects or Scenes Paradigm]]
#[[Isometric Force Paradigm]]
#[[Mental Rotation Paradigm]]
#[[Micturition Task Paradigm]]
#[[Music Comprehension or Production Paradigm]]
#[[n-back Paradigm]]
#[[Naming (Covert) Paradigm]]
#[[Naming (Overt) Paradigm]]
#[[Non-Painful Electrical Stimulation Paradigm]]
#[[Non-Painful Thermal Stimulation Paradigm]]
#[[Oddball Discrimination Paradigm]]
#[[Olfactory Monitor or Discrimination Paradigm]]
#[[Orthographic Discrimination Paradigm]]
#[[Pain Monitor or Discrimination Paradigm]]
#[[Paired Associate Recall Paradigm]]
#[[Passive Listening Paradigm]]
#[[Passive Viewing Paradigm]]
#[[Phonological Discrimination Paradigm]]
#[[Pitch Monitor or Discrimination Paradigm]]
#[[Pointing Paradigm]]
#[[Posner Task Paradigm]]
#[[Reading (Covert) Paradigm]]
#[[Reading (Overt) Paradigm]]
#[[Recitation or Repetition (Covert) Paradigm]]
#[[Recitation or Repetition (Overt) Paradigm]]
#[[Rest Paradigm]]
#[[Reward Task Paradigm]]
#[[Saccades Paradigm]]
#[[Semantic Monitor or Discrimination Paradigm]]
#[[Sequence Recall or Learning Paradigm]]
#[[Simon Task Paradigm]]
#[[Sleep Paradigm]]
#[[Spatial or Location Discrimination Paradigm]]
#[[Sternberg Task Paradigm]]
#[[Stroop Task Paradigm]]
#[[Subjective Emotional Picture Discrimination Paradigm]]
#[[Syntactic Discrimination Paradigm]]
#[[Tactile Monitor or Discrimination Paradigm]]
#[[Task Switching Paradigm]]
#[[Theory of Mind Task Paradigm]]
#[[Tone Monitor or Discrimination Paradigm]]
#[[Tower of London Paradigm]]
#[[Transcranial Magnetic Stimulation Paradigm]]
#[[Vibrotactile Monitor or Discrimination Paradigm]]
#[[Video Games Paradigm]]
#[[Visual Distractor or Visual Attention Paradigm]]
#[[Visual Pursuit or Tracking Paradigm]]
#[[Whistling Paradigm]]
#[[Wisconsin Card Sorting Test Paradigm]]
#[[Word Generation (Covert) Paradigm]]
#[[Word Generation (Overt) Paradigm]]
#[[Word Stem Completion (Covert) Paradigm]]
#[[Word Stem Completion (Overt) Paradigm]]
#[[Writing Paradigm]]

===CogPO Relationships===
Proper curation of the above concepts required creation of a set of novel relationships:
{|
|-
|  width=&quot;200&quot; | [[has_stimulus]]
|  width=&quot;200&quot; | [[has_response]]
|  width=&quot;200&quot; | [[has_instructions]]
|-
| [[has_stimulus_modality]]||[[has_response_modality]]||[[has_contrast]]
|-
| [[included_in_contrast]]||[[includes_condition]]||[[related_to]]
|}

===Basic Formal Ontology===
CogPO uses a number of terms from Basic Formal Ontology ([http://www.ifomis.org/bfo/ BFO]), Ontology for Biomedical Investigations ([http://obi-ontology.org/page/Main_Page OBI]), and the Information Artifact Ontology ([http://code.google.com/p/information-artifact-ontology/ IAO]):
{|
|-
|  width=&quot;200&quot; | [[action specification]]
|  width=&quot;200&quot; | [[fiat object part]]
|  width=&quot;200&quot; | [[object aggregate]]
|-
| [[planned process]]||[[process aggregate]]||[[quality]]
|-
| [[role]]
|}

===For More Information===
Please see the [[Aims of the CogPO Project]] or [[CogPO's Wiki Policies]].</text>
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